Versuchen Sie Folgendes:
SELECT *, MAX(conversations_mails.created_on) As conversation_last_reply,
MAX(conversations_mails.id) AS maxId
FROM conversations
LEFT JOIN conversations_mails ON conversations_mails.conversation_id = conversations.id
WHERE conversations_mails.id = (select max(conversations_mails.id) from conversations_mails where conversations_mails.conversation_id = conversations.id)
GROUP BY conversations.id
ORDER BY conversation_last_reply DESC